gen_report

This function creates a comprehensive HTML report from discovery results
and visualizations.

A suite of tools for literature-based discovery in biomedical research.
Provides functions for retrieving scientific articles from 'PubMed' and
other NCBI databases, extracting biomedical entities (diseases, drugs, genes, etc.),
building co-occurrence networks, and applying various discovery models
including 'ABC', 'AnC', 'LSI', and 'BITOLA'. The package also includes
visualization tools for exploring discovered connections.

Chao Liu Liu

LBDiscover

Literature-Based Discovery Tools for Biomedical Research

Chao Liu 

gen_report function

<dl><dt>results_list</dt>
<dd>A list of result data frames from different approaches</dd>
<dt>visualizations</dt>
<dd>A list with paths to visualization files</dd>
<dt>articles</dt>
<dd>Prepared article data</dd>
<dt>output_file</dt>
<dd>Filename for the output HTML report</dd>
<dt>verbose</dt>
<dd>Logical; if TRUE, print status messages (default: TRUE)</dd></dl>

Arguments

Generate comprehensive discovery report — gen_report

<dl>

<dt>results_list</dt>
<dd>A list of result data frames from different approaches</dd>


<dt>visualizations</dt>
<dd>A list with paths to visualization files</dd>


<dt>articles</dt>
<dd>Prepared article data</dd>


<dt>output_file</dt>
<dd>Filename for the output HTML report</dd>


<dt>verbose</dt>
<dd>Logical; if TRUE, print status messages (default: TRUE)</dd>

</dl>

gen_report: Generate comprehensive discovery report

Description

Usage

Value

Arguments