example_painting_p2

<p>Example painting data (average ancestry probabilities) of a chromosome for population 2, including 2000 genomes (observations) and 200 single nucleotide polymorphisms (SNPs).</p>

datasets

Computation of linkage disequilibrium of ancestry (LDA) and linkage disequilibrium of ancestry score (LDAS). LDA calculates the pairwise linkage disequilibrium of ancestry between single nucleotide polymorphisms (SNPs). LDAS calculates the LDA score of SNPs. The methods are described in Barrie W, Yang Y, Irving-Pease E.K, et al (2024) <doi:10.1038/s41586-023-06618-z>.

Yaoling Yang

LDAandLDAS

Linkage Disequilibrium of Ancestry (LDA) and LDA Score (LDAS)

Daniel Lawson

example_painting_p2 function

<p>A data frame with 1500 haploid genomes (observations) on 200 SNPs (variables).</p>

example_painting_p2: Example painting data for population 2.

Description

Usage

Arguments

Format

Examples