heat.scale

Numeric vector of length 2, minimum and maximum of values in the palette. Should correspond to <code>zlim</code> in <code><a href="/link/heat.map?package=LPS&version=1.0.4" rd-options="" data-mini-rdoc="LPS::heat.map">heat.map</a></code>, consider to use <code><a href="/link/heat.map?package=LPS&version=1.0.4" rd-options="" data-mini-rdoc="LPS::heat.map">heat.map</a></code> invi

zlim

Character vector of colors used in the heat map. Should correspond to <code>col.heatmap</code> in <code><a href="/link/heat.map?package=LPS&version=1.0.4" rd-options="" data-mini-rdoc="LPS::heat.map">heat.map</a></code>, consider to use <code><a href="/link/heat.map?package=LPS&version=1.0.4" rd-options="" data-mini-rdoc="LPS::heat.map">heat.map</a></code> invisible return to ge

col.heatmap

Numeric vector, values shown in the axis.

Single logical value, whether to plot an horizontal or a vertical scale.

horiz

Single logical value, whether to legend <code>median</code> and <code>mad</code> or <code>mean</code> and <code>sd</code>. Should correspond to <code><a href="/link/heat.map?package=LPS&version=1.0.4" rd-options="" data-mini-rdoc="LPS::heat.map">heat.map</a></code> <code>norm.robust</code> value.

robust

This function plots a color scale using a custom color palette, to legend <code><a href="/link/heat.map?package=LPS&version=1.0.4" rd-options="" data-mini-rdoc="LPS::heat.map">heat.map</a></code> derivated functions.

This package provides functions implementing the Linear Predictor Score approach, as initiated by Radmacher et al. (J Comput Biol 2001) and enhanced by Wright et al. (PNAS 2003). Given a set of continuous variables (typically gene expression values), it builds a simple score able to retrieve previously defined classes.

heat.scale: Plots a heat map color scale, for legend

Description

Usage

Arguments

See Also