Usage
heatmapairs(mat, main = "Heat MA pairs", xlim = NULL, ylim = NULL, labels = NULL, add.points = FALSE, group = NULL, color.group = "magenta", method = "spearman", colpal = "heat", pch = 19, cexplot = 0.5, ncol = 30, grid = 100, alpha = NULL, add.contour = FALSE, nlevels = 10, color.contour = "black", greyscale = FALSE, add.line = TRUE, color.line = "darkgrey", lwd = 2, ...)
Arguments
main
the title of the plot
xlim
xlimits, standard graphics parameter
ylim
ylimits, standard graphics parameter
labels
labels to be shown on the diagonal
add.points
should a certain group of points be colored somehow
group
certain group of points that should be highlighted
color.group
color in which the certain group of points should be highlighted
colpal
which colorcolpal should be chosen ( see disco() )
ncol
the number of colors to use
grid
size of the grid ( see kde2d )
alpha
alpha value for color opacity
add.contour
should the contour lines be added
nlevels
number of levels of the contour lines
color.contour
color of the contour lines
greyscale
should the colorpalette be in greyscales
add.line
add horizontal line to the plot
color.line
color of the horizontal line
lwd
lwd, standard graphics parameter
...
additional parameters to be passed to points and plot