LadderFuelsR (version 0.0.6)

get_distance: Distances between fuel layers

Description

This function calculates distances (and their heights) between fuel layers as the difference between consecutive gaps and fuel bases (the gap height always must be lower than the fuel base height).

Usage

get_distance (gap_cbh_metrics,gaps_perc,step=1,min_height=1.5,verbose=TRUE)

Value

A data frame giving distances (and their heights) between fuel layers in meters.

Arguments

gap_cbh_metrics

data frame with gaps (distances) and fuel base heights (output of [get_gaps_fbhs()] function). An object of the class text.

gaps_perc

data frame with Leaf Area Density (LAD) percentiles for each height values (output of [calculate_gaps_perc()] function). An object of the class text.

step

Numeric value for the actual height bin step (in meters).

min_height

Numeric value for the actual minimum base height (in meters).

verbose

Logical, indicating whether to display informational messages (default is TRUE).

Author

Olga Viedma, Carlos Silva, JM Moreno and A.T. Hudak

Details

# List of tree metrics:

• treeID: tree ID with strings and numeric values

• treeID1: tree ID with only numeric values

• cbh - Height of the fuel layers base height (m)

• gap - Height of gaps between consecutive fuel layers (m)

• dist: Distance between consecutive fuel layers (m)

• Hdist - Height of the distance between consecutive fuel layers (m)

• max_height - Maximum height of the tree profile

See Also

get_gaps_fbhs

calculate_gaps_perc

Examples

library(magrittr)
library(gdata)
library(dplyr)

# Before running this example, make sure to run get_gaps_fbhs().
if (interactive()) {
gap_cbh_metrics <- get_gaps_fbhs()
LadderFuelsR::gap_cbh_metrics$treeID <- factor(LadderFuelsR::gap_cbh_metrics$treeID)

# Before running this example, make sure to run calculate_gaps_perc().
LadderFuelsR::gaps_perc$treeID <- factor(LadderFuelsR::gaps_perc$treeID)

trees_name1 <- as.character(gaps_perc$treeID)
trees_name2 <- factor(unique(trees_name1))

metrics_distance_list <- list()

for (i in levels(trees_name2)) {

# Filter data for each tree
tree1 <- gap_cbh_metrics |> dplyr::filter(treeID == i)
tree2 <- gaps_perc |> dplyr::filter(treeID == i)
# Get distance metrics for each tree
metrics_distance <- get_distance(tree1, tree2, step=1, min_height=1.5)
metrics_distance_list[[i]] <- metrics_distance
}
# Combine the individual data frames
distance_metrics <- dplyr::bind_rows(metrics_distance_list)
}