display_map

This function create a blank Leaflet map using the leaflet function from the leaflet package.
If a dataframe is provided, it will be used for the creation of the map.

Allow to visualise data on the NCBI phylogenetic tree as presented in Lifemap <https://lifemap.cnrs.fr/>. It takes as input a dataframe with at least a "taxid" column containing NCBI format TaxIds and allows to draw multiple layers with different visualisation tools.

Aurélie Siberchicot

LifemapR

Data Visualisation on 'Lifemap' Tree

Cassandra Bompard

Damien M. de Vienne

Julien Barnier

display_map function

<dl><dt>df</dt>
<dd>A dataframe. If given, its columns can be easily accessed with "~" (eg. ~GC.).</dd>
<dt>basemap</dt>
<dd>Deprecated argument.</dd></dl>

Arguments

Create a Lifemap base. — display_map

<dl>

<dt>df</dt>
<dd>A dataframe. If given, its columns can be easily accessed with "~" (eg. ~GC.).</dd>


<dt>basemap</dt>
<dd>Deprecated argument.</dd>

</dl>

display_map: Create a Lifemap base.

Description

Usage

Value

Arguments

Examples