LowMACA (version 1.4.2)

bpAll: Draw a mutation barplot

Description

bpAll draws a stacked barplot of the mutations mapped on the consensus sequence

Usage

bpAll(object)

Arguments

object

an object of class LowMACA

Value

NULL

Details

Returns a barplot in which mutations are stacked per position on the consensus sequence. Every color represent mutations taht map on the same input sequence (either a protein or a pfam) The LowMACA object must pass through the methods alignSequences , getMutations , mapMutations

See Also

lmPlot

Examples

#Load homeobox example and draw plot
data(lmObj)
lmObj <- entropy(lmObj)
bpAll(lmObj)