MACP (version 0.1.0)

data_filtering: Data Filtering

Description

This function removes proteins for which peptide only detected in one fraction (i.e., "one-hit-wonders") across the co-elution table, common contaminants (e.g., keratins) only for mouse and human organisms and frequent flyers.

Usage

data_filtering(x)

Value

Filtered matrix.

Arguments

x

A data matrix object with rows including proteins and fractions along the columns.

Author

Matineh Rahmatbakhsh,

Details

data_filtering

Examples

# Load the co-elution data
data("exampleData")
# Perform raw data pre-processing
datOut <- data_filtering(exampleData)