This function uses convert_orthologs
function to support ortholog mapping of protein complexes between any pair
of 700+ species.
orthMappingCpx(
datInput,
input_species,
output_species,
input_taxid,
output_taxid
)A list containing complexes, whose members converted to output_species.
A list containing reference complexes (i.e., CORUM complexes). Note that the members of each complexes must be represented by UniProt accession identifier.
Name of the input species (e.g., "mouse","fly").
See map_species to return a full list of
available species.
Name of the output species (e.g., "human").
See map_species to return a full list of
available species.
A numeric value that specifies the NCBI taxonomy identifier (TaxId) for input organism (e.g., 10090).
A numeric value that specifies the NCBI taxonomy identifier (TaxId) for output organism.
Matineh Rahmatbakhsh, matinerb.94@gmail.com
orthMappingCpx