checkRecalibration

Dashed gray lines indicate the mz used for re-calibration ± the tolerance.
Red dashed line indicate the mz used for re-calibration and solid lines indicate peaks.
The spectrum will show the peak used for re-calibration ± 10x the tolerance.

Conduct automated cell-based assays using Matrix-Assisted Laser Desorption/Ionization (MALDI) methods for high-throughput screening of signals responsive to treatments. The package efficiently identifies high variance signals and fits dose-response curves to them. Quality metrics such as Z', V', log2FC, and CRS are provided for evaluating the potential of signals as biomarkers. The methodologies were introduced by Weigt et al. (2018) <doi:10.1038/s41598-018-29677-z> and refined by Unger et al. (2021) <doi:10.1038/s41596-021-00624-z>.

Thomas Enzlein

MALDIcellassay

Automated MALDI Cell Assays Using Dose-Response Curve Fitting

checkRecalibration function

<dl><dt>object</dt>
<dd>Object of class MALDIassay</dd>
<dt>idx</dt>
<dd>Numeric, index of spectrum to plot</dd></dl>

Arguments

Check the recalibration of spectra from a MALDIassay object — checkRecalibration

<dl>

<dt>object</dt>
<dd>Object of class MALDIassay</dd>


<dt>idx</dt>
<dd>Numeric, index of spectrum to plot</dd>

</dl>

checkRecalibration: Check the recalibration of spectra from a MALDIassay object

Description

Usage

Value

Arguments

Examples