MALDIquantForeign (version 0.2)

importMzMl: Import mzML files

Description

This function imports files in mzML file format into MassSpectrum-class objects.

Usage

importMzMl(path, verbose = FALSE)

Arguments

path

character, path to directory or file which should be read in.

verbose

logical, verbose output?

Value

• a list of MassSpectrum-class objects.

References

http://strimmerlab.org/software/maldiquant/, Definition of mzML format: http://www.psidev.info/mzml_1_0_0%20

See Also

MassSpectrum-class, readMzXmlFile

Examples

library("MALDIquant")
library("MALDIquantForeign")

## get example directory
exampleDirectory <- system.file(file.path("tests", "data"),
                                package="MALDIquantForeign")

## import
s <- importMzMl(exampleDirectory)