MAMA (version 2.1.0)

join.results: Function to join results from meta-analysis to one list

Description

Function joins results from meta-analysis to one list. It uses predefined types of results and transform some of them.

Usage

join.results(..., type, genenames)

Arguments

...

Outputs from different function for methods of meta-analysis of microarray

type

a numeric vector idicating from which function the output is, kth element in type corresponds to kth element of ...

genenames

a character vector - names of all genes (or probe ID) included in meta-analysis = rownames of gene expression data matrix

Value

• A list in which each slot refers to one meta-analytical method and contains a data frame with all outputs available from the method for one gene.

Details

Values below have to be used in type.

• 1

{for functions: pvalcombination, pvalcombination.paired, EScombination or EScombination.paired} 2{for function performSOGL} 3{for function topGene} 4{for function MAP.genes} 5{for function zScores, ScoresFDR, z.stat, tspcalc}