MAPITR_TestData_Genotypes

<p>A simulated dataset of genotypes for use in unit
tests</p>

data

A genetic analysis tool and variance component
model for identifying marginal epistasis between pathways
and the rest of the genome. 'MAPITR' uses as input a matrix
of genotypes, a vector of phenotypes, and a list of
pathways. 'MAPITR' then iteratively tests each pathway for
epistasis between any variants within the pathway versus
any variants remaining in the rest of the genome. 'MAPITR'
returns results in the form of p-values for every pathway
indicating whether the null model of there being no
epistatic interactions between a pathway and the rest of
the genome can be rejected.

Michael Turchin

MAPITR

MArginal ePIstasis Test for Regions

Gregory Darnell

Lorin Crawford

Sohini Ramachandran

Peter Carbonetto

MAPITR_TestData_Genotypes function

<p>A data frame with 500 rows (individuals) and 750 
variables (SNPs)</p>

Format

MAPITR TestData Genotypes — MAPITR_TestData_Genotypes

MAPITR TestData Genotypes

MAPITR_TestData_Genotypes: MAPITR TestData Genotypes

Description

Arguments

Format