CheckAlignment.SJ

Checks if the metadata aligns with the columns and rows of the matrix for splice junction data prior to PSI computation.

Alternative splicing represents an additional and underappreciated layer of complexity underlying gene expression profiles. Nevertheless, there remains hitherto a paucity of software to investigate splicing dynamics at single-cell resolution. 'MARVEL' enables splicing analysis of single-cell RNA-sequencing data generated from plate- and droplet-based library preparation methods.

Sean Wen

MARVEL

Revealing Splicing Dynamics at Single-Cell Resolution

CheckAlignment.SJ function

<dl><dt>MarvelObject</dt>
<dd>Marvel object. S3 object generated from <code>CreateMarvelObject</code> function.</dd></dl>

Arguments

Check splice junction data — CheckAlignment.SJ

<dl>

<dt>MarvelObject</dt>
<dd>Marvel object. S3 object generated from <code>CreateMarvelObject</code> function.</dd>

</dl>

CheckAlignment.SJ: Check splice junction data

Description

Usage

Value

Arguments

Examples