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MCMCglmm (version 1.06)

MCMC Generalised Linear Mixed Models

Description

MCMC Generalised Linear Mixed Models

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Version

Install

install.packages('MCMCglmm')

Monthly Downloads

5,336

Version

1.06

License

GPL version 2 or newer

Maintainer

Jarrod Hadfield

Last Published

March 17th, 2009

Functions in MCMCglmm (1.06)

Dexpressions

List of unevaluated expressions for (mixed) partial derivatives of fitness with respect to linear predictors.

Ddivergence

d-divergence

PlodiaR

Resistance of Indian meal moth caterpillars to the granulosis virus PiGV.

Tri2M

Lower/Upper Triangle Elements of a Matrix

krzanowski.test

Krzanowski's Comparison of Subspaces

MCMCglmm

Multivariate Generalised Linear Mixed Models

PlodiaPO

Phenoloxidase measures on caterpillars of the Indian meal moth.

Dtensor

Tensor of (mixed) partial derivatives

plotsubspace

Plots covariance matrices

posterior.mode

Estimates the mode of a vector using kernel density estimation

PlodiaRB

Resistance (as a binary trait) of Indian meal moth caterpillars to the granulosis virus PiGV.

KPPM

Kronecker Product Permutation Matrix

rIW

Random Generation from the Conditional Inverse Wishart Distribution

knorm

(Mixed) Central Moments of a Multivariate Normal Distribution

list2bdiag

Forms the direct product from a list of matrices

commutation

Commutation Matrix

sm2asreml

Converts sparseMatrix to asreml's giv format

MCMCglmm-package

Multivariate Generalised Linear Mixed Models

rbv

Random Generation of MVN Breeding Values and Phylogenetic Effects

kunif

Central Moments of a Uniform Distribution

prunePed

Pedigree pruning

Ptensor

Tensor of Sample (Mixed) Central Moments

inverseA

Inverse Relatedness Matrix and Phylogenetic Covariance Matrix

evalDtensor

Evaluates a list of (mixed) partial derivatives