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MDimNormn (version 0.8.0)

Multi-Dimensional MA Normalization for Plate Effect

Description

Normalize data to minimize the difference between sample plates (batch effects). For given data in a matrix and grouping variable (or plate), the function 'normn_MA' normalizes the data on MA coordinates. More details are in the citation. The primary method is 'Multi-MA'. Other fitting functions on MA coordinates can also be employed e.g. loess.

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Version

Install

install.packages('MDimNormn')

Monthly Downloads

169

Version

0.8.0

License

GPL-3

Maintainer

Mun-Gwan Hong

Last Published

August 12th, 2015

Functions in MDimNormn (0.8.0)

normn MA

Multi-dimensional MA normalization for plate effect
SBA

Artificially generated data alike that of Suspension bead arrays