MDplot (version 0.2)

translate_aminoacids: Function to translate between canonical and GROMOS amino acid abbreviations

Description

Converts an aminoacid naming scheme in the context of GROMOS (e.g. containing HISH) into canonical three- or one-letter codes.

Usage

translate_aminoacids( input,
                      switchMode)

Arguments

input

Vector of GROMOS abbreviations.

switchMode

Type "1" results in three letter, type "2" in single-letter code.

Examples

# to one letter code
test <- c( "ALA", "HISA", "SER" )
MDplot::translate_aminoacids( test, switchMode = 2 )