MEET (version 5.1.1)

align.MEME: Multiple sequence alignment by means of MEME.

Description

DNA sequences are aligned by means of MEME Version 4.4.0. (Multiple Expectation-Maximization for Motif Elicitation)

Usage

align.MEME(filein, fileout = "Sq.fa", iicc)

Arguments

filein

A set of nucleotide sequences in FASTA format.

fileout

Output file in FASTA format

iicc

A list of argument input.

Value

Details

This function needs aaMI-package. This funtions works with meme

See Also

align.clustalw, align.MUSCLE