MEET (version 5.1.1)

correction.entropy: Correction entropy from the Finite Sample Size Effect

Description

Each training matrix is formed by a finite number of samples. The probability estimation error using the nucleotide frequency causes a bias on the uncertainty measurement

Usage

correction.entropy(q, p, long, iicc)

Arguments

q

Renyi Order

p

Sample size

long

Length of the binding site

iicc

A list of options

Details

Sample size has to be =< 50.

See Also

correctionaprox,entropy, redundancy, correction.redundancy

Examples

data(TranscriptionFactor)
data(iicc)
data(BackgroundOrganism)
data(RenyiOrder)
correction.entropy(q,p=nrow(TranscriptionFactor),long=1,iicc)