MEET (version 5.1.1)

joint.probability: Joint Probability

Description

This function calculates the joint probability of each base-couple among two positions of the training.set

Usage

joint.probability(training.set,Prob,Probtrans)

Arguments

training.set

A set of aligned nucleotide sequence

Prob

Background probability of each base within genome

Probtrans

Background probability of correlation among bases within genome

See Also

probability

Examples

require("MEET")
data(TranscriptionFactor)
data(BackgroundOrganism)
training.set<-TranscriptionFactor
Probtrans<-probability.couple(Prob)
pmXY<-joint.probability(training.set, Prob,Probtrans)