standardout

Output detector for ITEME, MEME, transMEME and MDscan

Rdetector

Set of initial conditions for the MEET-package: mode, method, background,alignment,threshold,parameters,Transcriptionfactor,nummotif,lenmotif,sentit,position,missing,vector,gapopen,maxiters,gapextend

iicc


This function writes output detector (ITEME, MEME, transMEME and MDscan) in standard format.


MEET (Motif Elements Estimation Toolkit) is a R-package
that integrates a set of computational algorithms for the
detection of Transcription Factor Binding Sites (TFBS).

standardout: Standard output detector

Description

Usage

Arguments

Details