MEET (version 5.1.1)

writeMEME: Write a training matrix in a MEME/MAST format

Description

This function rewrites a training matrix (a set of aligned nucleotide sequences) in a MEME/MAST format.

Usage

writeMEME(matriu, m)

Arguments

matriu

A set of aligned nucleotide sequences

m

Number of TFBS sequence used on leave-one-out cross-validation

See Also

MEME,transMEME,DMEME,DtransMEMEME

Examples

require("MEET")
data(TranscriptionFactor)
matriu<-TranscriptionFactor
writeMEME(matriu, m=1)