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MESS (version 0.5.5)
Miscellaneous Esoteric Statistical Scripts
Description
A mixed collection of useful and semi-useful diverse statistical functions, some of which may even be referenced in The R Primer book.
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Install
install.packages('MESS')
Monthly Downloads
2,314
Version
0.5.5
License
GPL-2
Issues
2
Pull Requests
0
Stars
4
Forks
9
Repository
https://github.com/ekstroem/MESS
Maintainer
Claus Ekstrm
Last Published
January 14th, 2019
Functions in MESS (0.5.5)
Search functions
cmd
Correlation matrix distance
bdstat
Danish live births and deaths
repmat
Fast replication of a matrix
drop1.geem
Drop All Possible Single Terms to a geem Model Using Wald or Score Test
bees
Bee data. Number of different types of bees caught.
drop1.geeglm
Drop All Possible Single Terms to a geeglm Model Using Wald or Score Test
col.tint
Tint an RGB color
clotting
Blood clotting for 158 rats
wallyplot.default
Plots a Wally plot
feature.test
Inference for features identified by the Lasso
categorize
A table function to use with magrittr pipes
filldown
Fill down NA with the last observed observation
common.shared
Compute a common shared environment matrix
extended.shared
Compute a common shared environment matrix
fac2num
Convert factor to numeric vector
ks_cumtest
Kolmogorov-Smirnov goodness of fit test for cumulative discrete data
pairwise_Schur_product
Compute Schur products (element-wise) of all pairwise combinations of columns in matrix
age
Compute the age of a person from two dates.
lifeexpect
Estimated life expectancy for Danish newborns
col.shade
Shade an RGB color
auc
Compute the area under the curve for two vectors.
power_mcnemar_test
Power Calculations for Exact and Asymptotic McNemar Test in a 2 by 2 table
matched
Flu hospitalization
mfastLmCpp
Fast marginal simple regresion analyses
ordered.clusters
Check if unique elements of a vector appear in contiguous clusters
lower.tri.vector
Split Matrix by Clusters and Return Lower Triangular Parts as Vector
pairwise.cor.test
Pairwise Tests for Association/Correlation Between Paired Samples
QIC.geeglm
Quasi Information Criterion
monte_carlo_chisq_test
Two-sided table test with fixed margins
quadform
Fast quadratic form computation
power_prop_test
Power Calculations for Two-Sample Test for Proportions with unequal sample size
power_binom_test
Power Calculations for Exact Test of a simple null hypothesis in a Bernoulli experiment
bin
Fast binning of numeric vector into equidistant bins
tracemp
Fast computation of trace of matrix product
power_t_test
Power calculations for one and two sample t tests with unequal sample size
col.alpha
Add and set alpha channel for RGB color
prepost.test
Pretest-posttest RCT for quantitative observations with possible missing values
rainman
Perception of points in a swarm
rud
Simulate randomized urn design
qdiag
Fast extraction of matrix diagonal
scorefct
Internal functions for the MESS package
nh4
Ammonia nitrogen found in river
MESS
Collection of miscellaneous useful and semi-useful functions
pairwise_combination_indices
Compute all pairwise combinations of indices
kwdata
Non-parametric Kruskal Wallis data example
geekin
Fit a generalized estimating equation (GEE) model with fixed additive correlation structure
gkgamma
Goodman-Kruskal's gamma statistic for a two-dimensional table
ht
Show the head and tail of an object
residualplot.default
Plots a standardaized residual
picea
Ozone concentration damage to picea spruce
adaptive.weights
Compute weights for use with adaptive lasso.
qpcr
Gene expression from real-time quantitative PCR
rootonorm
Hanging rootogram for normal distribution
smokehealth
Effect of smoking on self reported health
conditional_rowMeans
Parallel means conditional on number of non-missing
soccer
Danish national soccer players
cumsumbinning
Binning based on cumulative sum with reset above threshold
round_percent
Round vector of number to percentages
superroot2
Gene expression data from two-color dye-swap experiment
add_torows
Fast addition of vector to each row of matrix
expand_table
Expand table or matrix to data frame
happiness
Happiness score and tax rates for 148 countries
segregate.genes
Segregate genes through a pedigree
earthquakes
Earthquakes in 2015
greenland
Average yearly summer air temperature for Tasiilaq, Greenland
panel.hist
Panel plot of histogram and density curve
screen_variables
Screen variable before penalized regression
sinv
Invert a symmetric positive-definite matrix
rmvt.pedigree
Simulate residual multivariate t-distributed data from a polygenic model
rmvtnorm.pedigree
Simulate residual multivariate Gaussian data from a polygenic model
write.xml
Write a data frame in XML format
icecreamads
Ice cream consumption and advertising
panel.r2
Panel plot of R2 values for pairs