This function creates an inheritance cube to model a Wolbachia infection. Wolbachia is a parasite that can infect mosquitoes. It biases its inheritance through cytoplasmic incompatibility. This drive has 2 alleles at 1 locus:
W: has Wolbachia
w: does not have Wolbachia
cubeWolbachia(
eta = NULL,
phi = NULL,
omega = NULL,
xiF = NULL,
xiM = NULL,
s = NULL
)
Genotype-specific mating fitness
Genotype-specific sex ratio at emergence
Genotype-specific multiplicative modifier of adult mortality
Genotype-specific female pupatory success
Genotype-specific male pupatory success
Genotype-specific fractional reduction(increase) in fertility
Named list containing the inheritance cube, transition matrix, genotypes, wild-type allele, and all genotype-specific parameters.
Cytoplasmic Incompatibility:
male W cross female w -> all offspring die (complete penetrance)
male w cross female W -> all offspring inherit Wolbachia