base_aquatic_geno

This function takes a given aquatic (egg, larval, pupal) stage and sums over
the Erlang-distributed stages, returning summary trajectories by genotype.

A simulation modeling framework which significantly extends capabilities from the
'MGDrivE' simulation package via a new mathematical and computational framework based on stochastic Petri nets.
For more information about 'MGDrivE', see our publication: Sánchez et al. (2019) <doi:10.1111/2041-210X.13318>
Some of the notable capabilities of 'MGDrivE2' include: incorporation of human populations,
epidemiological dynamics, time-varying parameters, and a continuous-time simulation
framework with various sampling algorithms for both deterministic and stochastic interpretations.
'MGDrivE2' relies on the genetic inheritance structures provided in package 'MGDrivE', so we
suggest installing that package initially.

Agastya Mondal

MGDrivE2

Mosquito Gene Drive Explorer 2

Sean L. Wu

Jared B. Bennett

Héctor Manuel Sánchez Castellanos

Tomás M. León

Andrew J. Dolgert

John M. Marshall

base_aquatic_geno function

<dl><dt>out</dt>
<dd>the output of <code>sim_trajectory_R</code></dd>
<dt>spn_P</dt>
<dd>the places of the SPN, see details</dd>
<dt>elp</dt>
<dd>stage to summarize, one of: "egg", "larvae", "pupae"</dd></dl>

Arguments

Base Aquatic Function for Genotype Summary — base_aquatic_geno

<dl>

<dt>out</dt>
<dd>the output of <code>sim_trajectory_R</code></dd>


<dt>spn_P</dt>
<dd>the places of the SPN, see details</dd>


<dt>elp</dt>
<dd>stage to summarize, one of: "egg", "larvae", "pupae"</dd>

</dl>

base_aquatic_geno: Base Aquatic Function for Genotype Summary

Description

Usage

Value

Arguments

Details