batch_migration_stage

Internal function to sample and set up data structure for batch migration

A simulation modeling framework which significantly extends capabilities from the
'MGDrivE' simulation package via a new mathematical and computational framework based on stochastic Petri nets.
For more information about 'MGDrivE', see our publication: Sánchez et al. (2019) <doi:10.1111/2041-210X.13318>
Some of the notable capabilities of 'MGDrivE2' include: incorporation of human populations,
epidemiological dynamics, time-varying parameters, and a continuous-time simulation
framework with various sampling algorithms for both deterministic and stochastic interpretations.
'MGDrivE2' relies on the genetic inheritance structures provided in package 'MGDrivE', so we
suggest installing that package initially.

Agastya Mondal

MGDrivE2

Mosquito Gene Drive Explorer 2

Sean L. Wu

Jared B. Bennett

Héctor Manuel Sánchez Castellanos

Tomás M. León

Andrew J. Dolgert

John M. Marshall

batch_migration_stage function

<dl><dt>SPN_P</dt>
<dd>a set of Petri net places</dd>
<dt>rates</dt>
<dd>a vector of rates for each node</dd>
<dt>move</dt>
<dd>a movement matrix (where do the batches go?)</dd>
<dt>prob</dt>
<dd>the probability vector for each individual moving in each batch</dd>
<dt>stage</dt>
<dd>the life stage (one of 'ELP', 'F', 'M')</dd>
<dt>tmax</dt>
<dd>maximum simulation time</dd></dl>

Arguments

Internal function to sample and set up data structure for batch migration — batch_migration_stage

<dl>

<dt>SPN_P</dt>
<dd>a set of Petri net places</dd>


<dt>rates</dt>
<dd>a vector of rates for each node</dd>


<dt>move</dt>
<dd>a movement matrix (where do the batches go?)</dd>


<dt>prob</dt>
<dd>the probability vector for each individual moving in each batch</dd>


<dt>stage</dt>
<dd>the life stage (one of 'ELP', 'F', 'M')</dd>


<dt>tmax</dt>
<dd>maximum simulation time</dd>

</dl>

batch_migration_stage: Internal function to sample and set up data structure for batch migration

Description

Usage

Arguments