summarize_females_epi

For <code>MGDrivE2</code> simulations of mosquito epidemiological dynamics in a single
node or metapopulation network, this function sums over the male mate genotype
as well as EIP bins to get population trajectories of adult female mosquitoes
by their genotype and (S,E,I) status.

A simulation modeling framework which significantly extends capabilities from the
'MGDrivE' simulation package via a new mathematical and computational framework based on stochastic Petri nets.
For more information about 'MGDrivE', see our publication: Sánchez et al. (2019) <doi:10.1111/2041-210X.13318>
Some of the notable capabilities of 'MGDrivE2' include: incorporation of human populations,
epidemiological dynamics, time-varying parameters, and a continuous-time simulation
framework with various sampling algorithms for both deterministic and stochastic interpretations.
'MGDrivE2' relies on the genetic inheritance structures provided in package 'MGDrivE', so we
suggest installing that package initially.

Agastya Mondal

MGDrivE2

Mosquito Gene Drive Explorer 2

Sean L. Wu

Jared B. Bennett

Héctor Manuel Sánchez Castellanos

Tomás M. León

Andrew J. Dolgert

John M. Marshall

summarize_females_epi function

<dl><dt>out</dt>
<dd>the output of <code>sim_trajectory_R</code></dd>
<dt>spn_P</dt>
<dd>the places of the SPN, see details</dd></dl>

Arguments

Summarize Adult Females (One Node or Metapopulation Network, SEI Mosquitoes) — summarize_females_epi

<dl>

<dt>out</dt>
<dd>the output of <code>sim_trajectory_R</code></dd>


<dt>spn_P</dt>
<dd>the places of the SPN, see details</dd>

</dl>

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summarize_females_epi: Summarize Adult Females (One Node or Metapopulation Network, SEI Mosquitoes)

Description

Usage

Value

Arguments

Details