For MGDrivE2 simulations of mosquito epidemiological dynamics in a
node or network, this function summarizes human infection status, S and I. It
uses base_summarize_humans to do all of the work.
summarize_humans_epiSIS(out)a 4 to 6 column dataframe for plotting with ggplot2
the output of sim_trajectory_R
The return object depends on the data provided. If the simulation was only 1 node,
then no node designation is returned. If only one repetition was performed,
no rep designation is returned. Columns always returned include: time,
inf, genotype, and value.
For examples of using this function, see:
vignette("epi-node", package = "MGDrivE2")