MGFM (version 1.6.0)

getHtmlpage: Function to build HTML pages to show marker genes

Description

Function to build HTML pages to show marker genes

Usage

getHtmlpage(markers.list,chip, directory=getwd())

Arguments

markers.list

List of marker genes, returned by the function getMarkerGenes.

chip

Chip name.

directory

Path to the directory where to save the html pages.

Value

This function is used only for the side effect of creating HTML tables.

Details

This function is based on the function htmlpage from the R-package 'annotate'.

Examples

data("ds2.mat")
res.list <- getMarkerGenes(ds2.mat, samples2compare="all", annotate=TRUE, chip="hgu133a",
score.cutoff=1)
getHtmlpage(res.list, chip="hgu133a",directory=getwd())