clean_raw_mic

Removes leading "=" which can sometimes be present in raw MIC results. Also converts co-trimoxazole to trimethprim component only.

Analyse, plot, and tabulate antimicrobial minimum inhibitory concentration (MIC) data.
Validate the results of an MIC experiment by comparing observed MIC values to
a gold standard assay, in line with standards from the International Organization for
Standardization (2021) <https://www.iso.org/standard/79377.html>. Perform MIC prediction from
whole genome sequence data stored in the Pathosystems Resource Integration Center (2013)
<doi:10.1093/nar/gkt1099> database or locally.

Alessandro Gerada

Analysis of Antimicrobial Minimum Inhibitory Concentration Data

clean_raw_mic function

<dl><dt>mic</dt>
<dd>character containing MIC/s</dd></dl>

Arguments

Clean up raw MIC for use as a feature — clean_raw_mic

<dl>

<dt>mic</dt>
<dd>character containing MIC/s</dd>

</dl>

clean_raw_mic: Clean up raw MIC for use as a feature

Description

Usage

Value

Arguments

Examples