mic_range

Analyse, plot, and tabulate antimicrobial minimum inhibitory concentration (MIC) data.
Validate the results of an MIC experiment by comparing observed MIC values to
a gold standard assay, in line with standards from the International Organization for
Standardization (2021) <https://www.iso.org/standard/79377.html>. Perform MIC prediction from
whole genome sequence data stored in the Pathosystems Resource Integration Center (2013)
<doi:10.1093/nar/gkt1099> database or locally.

Alessandro Gerada

Analysis of Antimicrobial Minimum Inhibitory Concentration Data

mic_range function

<dl><dt>start</dt>
<dd>starting (highest) concentration</dd>
<dt>dilutions</dt>
<dd>number of dilutions</dd>
<dt>min</dt>
<dd>minimum (lowest) concentration</dd>
<dt>precise</dt>
<dd>force range to be high precision (not usually desired
behaviour)</dd></dl>

Arguments

Generate dilution series — mic_range

<dl>

<dt>start</dt>
<dd>starting (highest) concentration</dd>


<dt>dilutions</dt>
<dd>number of dilutions</dd>


<dt>min</dt>
<dd>minimum (lowest) concentration</dd>


<dt>precise</dt>
<dd>force range to be high precision (not usually desired
behaviour)</dd>

</dl>

mic_range: Generate dilution series

Description

Usage

Value

Arguments

Examples