moi_nk

<p>vector; a column of data corresponding
to a marker from the imported dataset.</p>

datmarker

<p>numeric vector; row numbers in excel file
where the new samples start.</p>

samorder

internal

The implemented methods reach out to scientists that seek to estimate multiplicity of infection (MOI) and lineage (allele) frequencies and prevalences at molecular markers using the maximum-likelihood method described in Schneider (2018) <doi:10.1371/journal.pone.0194148>, and Schneider and Escalante (2014) <doi:10.1371/journal.pone.0097899>. Users can import data from Excel files in various formats, and perform maximum-likelihood estimation on the imported data by the package's moimle() function.

moi_nk: Derives lineage prevalence counts

Description

Usage

Arguments

Value

See Also