moi_labels

Each dataset consists of several number of
 samples. Samples are specified by their sample ID which
 are placed in the first column of the excel worksheet.
 The function <code>moi_labels</code>, finds sample IDs and
 the row in which they start.

internal

The implemented methods reach out to scientists that seek to estimate multiplicity of infection (MOI) and lineage (allele) frequencies and prevalences at molecular markers using the maximum-likelihood method described in Schneider (2018) <doi:10.1371/journal.pone.0194148>, and Schneider and Escalante (2014) <doi:10.1371/journal.pone.0097899>. Users can import data from Excel files in various formats, and perform maximum-likelihood estimation on the imported data by the package's moimle() function.

Meraj Hashemi

MLMOI

Estimating Frequencies, Prevalence and Multiplicity of Infection

Kristan Schneider

moi_labels function

<dl><dt>s_total</dt>
<dd>sample IDs.</dd></dl>

Arguments

Finds sample IDs contained in a dataset — moi_labels

<dl>

<dt>s_total</dt>
<dd>sample IDs.</dd>

</dl>

moi_labels: Finds sample IDs contained in a dataset

Description

Usage

Value

Arguments

See Also