MOCHA (version 1.1.0)

exportOpenTiles: exportOpenTiles

Description

exportOpenTiles exports the open tiles of a given cell population to bigBed file for visualization in genome browsers.

Usage

exportOpenTiles(SampleTileObject, cellPopulation, outDir, verbose = FALSE)

Value

outList A List of output filepaths

Arguments

SampleTileObject

The SummarizedExperiment object output from getSampleTileMatrix

cellPopulation

The name of the cell population to export

outDir

Desired output directory where bigBed files will be saved

verbose

Set TRUE to display additional messages. Default is FALSE.

Examples

if (FALSE) {
MOCHA::exportOpenTiles(
  SampleTileObject = SampleTileObject,
  cellPopulation,
  outDir = tempdir(),
  verbose = TRUE
)
}