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MOJOV (version 1.0.1)

Mojo Variants: Rare Variants analysis

Description

A package for analysis between rare variants and quantitative traits by CMC (the combined multivariate and collapsing method).

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Version

Install

install.packages('MOJOV')

Monthly Downloads

4

Version

1.0.1

License

GPL (>= 2)

Maintainer

Ke-Hao Wu

Last Published

February 28th, 2013

Functions in MOJOV (1.0.1)

MOJOV.genoMatrix

A internal function. It generates a genotype matrix.
MOJOV.Summary-class

Class "MOJOV.Summary"
MOJOV.analysis

Analysis between rare variants and quantatitive traits using CMC.
MOJOV.wald.test

A test from aod package.
MOJOV.simulation

Simulation for CMC.
MOJOV.export

Export test result from a MOJOV class to file.
MOJOV.linearRegAnalysis

A internal function. Linear regression analysis between rare variants and phenotype.
phen

A data file contains phenotype.
MOJOV.genoVector

A internal function. It makes genotype matrix become a genotype vector.
MOJOV-package

Mojo Variants: Rare Variants analysis tool.
MOJOV-class

Class "MOJOV"
geno

A data file contains genotype.
MOJOV.read

Reading genotype and phenotype and generating a "MOJOV" class.
MOJOV.summary

Exporting summary information for genotype.
MOJOV.weight

Providing a weight vector.
MOJOV.saws

A test from saws package.
MOJOV.regTermTest

A internal function. A test from survey package.
MOJOV.phenotype

Ajusting phenotype data for covariates.