Herm-int

expandHerm

checkHerm

subsetHerm

<ul>
<li><code>expandHerm</code> expands the Herm list in SexPars to a matrix of fractions at age</li>
</ul><ul>
<li><code>checkHerm</code> checks that each array in the list has dimension nsim x maxage+1 x nyears + proyears.
For backwards compatibility, also converts matrices to arrays by adding the year dimension.</li>
</ul><ul>
<li><code>subsetHerm</code> returns year-specific Herm values.</li>
</ul>

Development, simulation testing, and implementation of management procedures for fisheries
(see Carruthers & Hordyk (2018) <doi:10.1111/2041-210X.13081>).

Adrian Hordyk

MSEtool

Management Strategy Evaluation Toolkit

Quang Huynh

Tom Carruthers

Chris Grandin

Herm-int function

<dl><dt>Herm</dt>
<dd>A list of Hermaphroditic fractions at age</dd>
<dt>maxage</dt>
<dd>The maximum age of stocks being simulated</dd>
<dt>np</dt>
<dd>The total number of stocks being simulated</dd>
<dt>nsim</dt>
<dd>The number of simulations</dd>
<dt>nyears</dt>
<dd>The number of historical years</dd>
<dt>proyears</dt>
<dd>The number of projection years</dd>
<dt>y</dt>
<dd>The year to subset</dd></dl>

Arguments

Author

<ul>
<li><code>expandHerm</code> expands the Herm list in SexPars to a matrix of fractions at age</li>
</ul>

<ul>
<li><code>checkHerm</code> checks that each array in the list has dimension nsim x maxage+1 x nyears + proyears.
For backwards compatibility, also converts matrices to arrays by adding the year dimension.</li>
</ul>

<ul>
<li><code>subsetHerm</code> returns year-specific Herm values.</li>
</ul>

Internal Herm functions — Herm-int

<dl>

<dt>Herm</dt>
<dd>A list of Hermaphroditic fractions at age</dd>


<dt>maxage</dt>
<dd>The maximum age of stocks being simulated</dd>


<dt>np</dt>
<dd>The total number of stocks being simulated</dd>


<dt>nsim</dt>
<dd>The number of simulations</dd>


<dt>nyears</dt>
<dd>The number of historical years</dd>


<dt>proyears</dt>
<dd>The number of projection years</dd>


<dt>y</dt>
<dd>The year to subset</dd>

</dl>

Herm-int: Internal Herm functions

Description

Usage

Arguments

Author