MScombine (version 1.4)

StudyRTdiff: Study RT differences to lately remove outliers

Description

Study the correlation between RT in positive and negative ionization modes to find those entities that have been associated wrongly.

Usage

StudyRTdiff(CommonEntitiesImproved)

Arguments

CommonEntitiesImproved

The resultant data set from the function RemoveMismatch

Value

Plot (RT+ vs RT-, regression, "residuals vs predicted", and Q-Q plot)

The CommonEntitiesImproved dataset now included a new column with residuals of each entity for the RT+ vs RT- regression.

Examples

# NOT RUN {
CommonEntitiesImproved<-StudyRTdiff(CommonEntitiesImproved)
# }