cluster_cutoff_at_first_empty_bin

Cut the hierarchical clustering tree to define clusters

The Mapper algorithm from Topological Data Analysis, the steps are as follows 1. Define a filter (lens) function on the data. 2. Perform clustering within each level set. 3. Generate a complex from the clustering results.

ChiChien Wang

MapperAlgo

Topological Data Analysis: Mapper Algorithm

Paul Pearson

Daniel Muellner

Gurjeet Singh

cluster_cutoff_at_first_empty_bin function

<dl><dt>heights</dt>
<dd>Heights of the clusters.</dd>
<dt>diam</dt>
<dd>Diameter of the clusters.</dd>
<dt>num_bins_when_clustering</dt>
<dd>Number of bins when clustering.</dd></dl>

Arguments

Cut the hierarchical clustering tree to define clusters — cluster_cutoff_at_first_empty_bin

<dl>

<dt>heights</dt>
<dd>Heights of the clusters.</dd>


<dt>diam</dt>
<dd>Diameter of the clusters.</dd>


<dt>num_bins_when_clustering</dt>
<dd>Number of bins when clustering.</dd>

</dl>

cluster_cutoff_at_first_empty_bin: Cut the hierarchical clustering tree to define clusters

Description

Usage

Value

Arguments