consensusG

order of genotyping error rate categories, with most reliable category first

cat.levels

logical; if a most represented genotype exists should it be saved

gmax

logical; should heterozygotes be saved over homozygotes - overrides <code>cat.levels</code>

A function for obtaining a consensus genotype from duplicate samples. The amount of missing data is minimised, and preference is given to samples with lower genotyping error

manip

models

The primary aim of MasterBayes is to use MCMC techniques to integrate over uncertainty in pedigree configurations estimated from molecular markers and phenotypic data.  Emphasis is put on the marginal distribution of parameters that relate the phenotypic data to the pedigree. All simulation is done in compiled C++ for efficiency.

consensusG: Obtains a consensus genotype from duplicate samples

Description

Usage

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Value

See Also