Matrix (version 1.2-7.1)

unpack: Representation of Packed and Unpacked (Dense) Matrices

Description

“Packed” matrix storage here applies to dense matrices (denseMatrix) only, and there is available only for symmetric (symmetricMatrix) or triangular (triangularMatrix) matrices, where only one triangle of the matrix needs to be stored.

unpack() unpacks “packed” matrices, where pack() produces “packed” matrices.

Usage

pack(x, ...)
"pack"(x, symmetric = NA, upperTri = NA, ...)
unpack(x, ...)

Arguments

x

symmetric

logical (including NA) for optionally specifying if x is symmetric (or rather triangular).

upperTri

(for the triangular case only) logical (incl. NA) indicating if x is upper (or lower) triangular.

...

further arguments passed to or from other methods.

Value

Details

These are generic functions with special methods for different types of packed (or non-packed) symmetric or triangular dense matrices. Use showMethods("unpack") to list the methods for unpack(), and similarly for pack().

Examples

showMethods("unpack")
(cp4 <- chol(Hilbert(4))) # is triangular
tp4 <- as(cp4,"dtpMatrix")# [t]riangular [p]acked
str(tp4)
(unpack(tp4))
stopifnot(identical(tp4, pack(unpack(tp4))))

(s <- crossprod(matrix(sample(15), 5,3))) # traditional symmetric matrix
(sp <- pack(s))
mt <- as.matrix(tt <- tril(s))
(pt <- pack(mt))
stopifnot(identical(pt, pack(tt)),
	  dim(s ) == dim(sp), all(s  == sp),
	  dim(mt) == dim(pt), all(mt == pt), all(mt == tt))
showMethods("pack")