MergeMaid (version 2.44.0)

intcorDens: plot of density functions of integrative correlations

Description

Given a mergeExpressionSet, this function calculates and plots the density function of the approximate integrative correlations, as well as densities for the "null distributions" obtained by randomly permuting sample IDs.

Usage

intcorDens(x,method,...)

Arguments

x

Object of class mergeExpressionSet.

method

The available method to use is "pearson".

...

Graphical parameters to be passed to plot.

Value

Details

Here we use the approximate method to calculate the integrative correlation.

See Also

mergeExpressionSet-class,intCor,modelOutcome

Examples

  if(require(Biobase) & require(MASS)){
  data(mergeData)
  merged  <-mergeExprs(sample1,sample2,sample3)

  intcorDens(merged)

  intcorDens(merged,cex.legend=1.5)

  intcorDens(merged,lty=2)
  }