Mergeomics (version 1.0.0)

kda2cytoscape.colormap: Assign one color to each unique module

Description

kda2cytoscape.colormap takes number of the modules and assigns a particular color to each module. Returns the color list (palette).

Usage

kda2cytoscape.colormap(ncolors)

Arguments

ncolors

number of the unique modules

Value

palette

color list: one color is assigned to each module

References

Shu L, Zhao Y, Kurt Z, Byars S, Tukiainen T, Kettunen J, Ripatti S, Zhang B, Inouye M, Makinen VP, Yang X. Mergeomics: integration of diverse genomics resources to identify pathogenic perturbations to biological systems. bioRxiv doi: http://dx.doi.org/10.1101/036012

See Also

kda2cytoscape

Examples

color.number = 5 ## let us assume we have 5 modules, assign 1 color to each:
palette <- kda2cytoscape.colormap(color.number)