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MeshAgreement (version 0.1.4)

Agreement Measures for 3D Meshes

Description

Calculates distance-based and volume-overlap-based agreement measures for triangular 3D meshes. These include the Hausdorff distance, the average surface distance, the Dice similarity coefficient, and the Jaccard similarity coefficient as documented in Stockinger et al. (2021) . Overall agreement for a set of meshes is calculated as the aggregate agreement for all pairwise comparisons. Based on algorithms provided by the 'VCGLIB' and 'CGAL' libraries. Includes web-based graphical user interface.

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install.packages('MeshAgreement')

Monthly Downloads

11

Version

0.1.4

License

GPL (>= 2)

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Maintainer

Daniel Wollschlaeger

Last Published

November 25th, 2022

Functions in MeshAgreement (0.1.4)

get_mesh_metro

Distances between two 3D meshes
mesh3dL_to_cgalMeshL

Convert mesh3d objects to cgalMesh objects
meshL_to_observerL

Turn list of meshes into list of observer/mesh lists
get_mesh_pairs

Get all pairs from list of 3D meshes
get_mesh_ui_pair

Union and intersection for a single pair of 3D meshes
get_mesh_ui

Union and intersection for pairs from a list of 3D meshes
read_mesh_one

Read one mesh file
get_name_elem

Return element of a comparison string
run_gui

Open web-based GUI in browser
read_mesh_obs

Read mesh files
read_mesh

Read mesh files
get_mesh_metro_pair

Distances between two 3D meshes
get_mesh_info

Get information about a list of oberver/mesh objects
get_mesh_agree_aggr

Aggregate agreement measures for 3D mesh pairs
get_mesh_agree_aggr_long

Shape aggregated agreement measures to long format
MeshAgreement-package

Agreement measures for 3D meshes
get_mesh_info_obs

Get information about a list of mesh objects
get_mesh_agree_long

Shape agreement measures to long format
get_mesh_agree_pair

Agreement measures for a single pair of 3D meshes
get_mesh_agree

Agreement measures for pairs from a list of 3D meshes
get_mesh_info_one

Get information about one mesh object
data_heart_obsL

Heart structures delineated by 3 observers