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MetaCycle (version 1.1.0)

Evaluate Periodicity in Large Scale Data

Description

Provides two functions-meta2d and meta3d for detecting rhythmic signals from time-series datasets. For analyzing time-series datasets without individual information, 'meta2d' is suggested, which could incorporates multiple methods from ARSER, JTK_CYCLE and Lomb-Scargle in the detection of interested rhythms. For analyzing time-series datasets with individual information, 'meta3d' is suggested, which takes use of any one of these three methods to analyze time-series data individual by individual and gives out integrated values based on analysis result of each individual.

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Version

Install

install.packages('MetaCycle')

Monthly Downloads

343

Version

1.1.0

License

GPL (>= 2)

Maintainer

Gang Wu

Last Published

December 5th, 2015

Functions in MetaCycle (1.1.0)

MetaCycle

MetaCycle Evaluate periodicity in large scale data
cycVignettesAMP

cycVignettesAMP
cycMouseLiverProtein

cycMouseLiverProtein
cycYeastCycle

cycYeastCycle
cycHumanBloodData

cycHumanBloodData
cycMouseLiverRNA

cycMouseLiverRNA
meta2d

Detect rhythmic signals from time-series datasets with multiple methods
cycHumanBloodDesign

cycHumanBloodDesign
cycSimu4h2d

cycSimu4h2d
meta3d

Detect rhythmic signals from time-series datasets with individual information