MetaDBparse (version 2.0.0)

build.PHARMGKB: Build PharmGKB

Description

Parses PharmGKB drugs and chemicals (drug metabolites, etc.), returns data table with columns compoundname, description, charge, formula and structure (in SMILES)

Usage

build.PHARMGKB(outfolder)

Arguments

outfolder

Which folder to save temp files to?

Value

data table with parsed database

See Also

download.file,unzip getURL str_match fread

Examples

# NOT RUN {
build.PHARMGKB(outfolder=tempdir())
# }