Creates MetaIntegrator formatted objects by downloading and formatting data from GEO.
getGEOData(gseVector, formattedNames = gseVector, qNorm = FALSE, ...)a vector of GSE ids (each a string)
a vector of formatted names corresponding to the GSE ids. Default: gseVector
perform quantile normalization of expression data within a dataset or not. Default: FALSE
will pass additional parameters to getGEO, including destdir, which specifies download location
a Pre-Analysis MetaObject containing the datasets loaded in $originalData
Note: if you get the error "Error: Couldn't find driver MySQL" then just library(RMySQL) and then re-run getGEOData