MetaIntegrator (version 2.1.3)

summaryROCCalc: Calculate the summaryROC statistics

Description

Calculate the summaryROC statistics

Usage

summaryROCCalc(metaObject, filterObject, bootstrapReps = 500)

Arguments

metaObject

a Meta object which must have the $originalData populated

filterObject

a MetaFilter object containing the signature genes that will be used for calculating the score

bootstrapReps

number of bootstrap simulations to run for confidence interval on summary ROC

Value

Summary AUC statistics

Examples

# NOT RUN {
summaryROCCalc(tinyMetaObject, filterObject = 
   tinyMetaObject$filterResults$pValueFDR0.05_es0_nStudies1_looaTRUE_hetero0)
# }