Calculate acceptance rates in MCMC chains
Import a shapefile
Convert data frame to landscape
Simulate landscape series occupation
Class 'metapopulation'
Internal functions for the MetaLandSim package.
Computes landscape connectivity metrics
Graphical display of the expansion
Class 'landscape'
Computes topological distance
Graphical display of the landscape
Produce a range expansion model
Remove the species occupancy from the landscape
Create files for use with R-package coda.
Modified patch occupancy data of Cabrera vole
Probability of occupancy, dispersal model
Function for mode estimation of a continuous variable
Combines two chains into a single chain.
Estimate the 'missing' design incidence function model
Remove a given number of patches from the landscape
Graphic User Interface
Summarize 'landscape' class objects
Landscape And Range Expansion Simulation
Create parameter data frame
Extract landscape from span.graph generated list
Class 'expansion'
Estimate the naive design incidence function model
Returning a matrix with information on connections between patches
Produce an edge (links) data frame
Simulate range expansion simulation
Summarize 'metapopulation' class objects
Batch landscape simulation
Sample parameter data frame number 1
Modified patch occupancy data of Cabrera vole as a data frame
Landscape loosing 5% of patches per time step
Sample parameter data frame number 2
Estimate parameters
Plot one landscape of the list created by span.graph
Returning information on a dynamic landscape list
Sample landscape with 10 simulated occupancy snapshots
Sample landscape with one simulated occupancy snapshot
Simulate landscape dynamics over a number of time steps
Creates random landscape graph
Simulate species occupancy in one dynamic landscape
Set of simulated data to use with the IFM parameter estimation functions. The data were generated using the code provided in "details".
Simulate landscape occupation
Stochastic Patch Occupancy Model
List with range.expansion output
Random landscape
Delivers the number of patches per cluster
Classify patches in clusters
Add a given number of patches to a landscape
Number of components of a landscape
Estimate the robust design incidence function model