plot.robust

Comprehensive network analysis package.
Calculate correlation network fastly, accelerate lots of analysis by parallel computing.
Support for multi-omics data, search sub-nets fluently.
Handle bigger data, more than 10,000 nodes in each omics.
Offer various layout method for multi-omics network and some interfaces to other software ('Gephi', 'Cytoscape', 'ggplot2'), easy to visualize.
Provide comprehensive topology indexes calculation, including ecological network stability.

Peng Chen

MetaNet

Network Analysis for Omics Data

plot.robust function

<dl><dt>x</dt>
<dd><code>robust_test()</code> result (robust object)</dd>
<dt>indexes</dt>
<dd>indexes selected to show</dd>
<dt>use_ratio</dt>
<dd>use the delete nodes ratio rather than nodes number</dd>
<dt>mode</dt>
<dd>plot mode, 1~3</dd>
<dt>...</dt>
<dd>additional arguments for <code>group_box</code></dd></dl>

Arguments

Plot robust — plot.robust

<dl>

<dt>x</dt>
<dd><code>robust_test()</code> result (robust object)</dd>


<dt>indexes</dt>
<dd>indexes selected to show</dd>


<dt>use_ratio</dt>
<dd>use the delete nodes ratio rather than nodes number</dd>


<dt>mode</dt>
<dd>plot mode, 1~3</dd>


<dt>...</dt>
<dd>additional arguments for <code>group_box</code></dd>

</dl>

plot.robust: Plot robust

Description

Usage

Value

Arguments