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MetaPCA (version 0.1.4)

MetaPCA: Meta-analysis in the Dimension Reduction of Genomic data

Description

MetaPCA implements simultaneous dimension reduction using PCA when multiple studies are combined. We propose two basic ideas to find a common PC subspace by eigenvalue maximization approach and angle minimization approach, and we extend the concept to incorporate Robust PCA and Sparse PCA in the meta-analysis realm.

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Version

Install

install.packages('MetaPCA')

Monthly Downloads

39

Version

0.1.4

License

GPL-2

Issues

Pull Requests

Stars

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Maintainer

Don Kang

Last Published

June 15th, 2011

Functions in MetaPCA (0.1.4)

MetaPCA

MetaPCA: Meta-analysis in the Dimension Reduction of Genomic data
PlotPC2D

MetaPCA: Meta-analysis in the Dimension Reduction of Genomic data
MetaPCA-package

MetaPCA: Meta-analysis in the Dimension Reduction of Genomic data
DropDupGenes

MetaPCA: Meta-analysis in the Dimension Reduction of Genomic data
Spellman

4 Spellman cancer studies
prostate

4 prostate cancer studies
PreprocessMetaAnalysis

MetaPCA: Meta-analysis in the Dimension Reduction of Genomic data
requireAll

MetaPCA: Meta-analysis in the Dimension Reduction of Genomic data